Introduction

Infectious bronchitis virus (IBV) is a coronavirus,

that initially replicate in respiratory tract of

chickens and ultimately reach reproductive,

renal and lymphoid organs to establish a

systemic infection.

The virus has the potential to persist in the

cecal tonsils and maintain the viral shedding

even when the respiratory tract has cleared the

infection.

The microbiome plays a major role in

protection against infection but IBV infection

can alter microbiome composition.

We aim to understand the relationship

between IBV infection and respiratory and gut

microbiome shift.

We hypothesize that IBV DMV/1639, which can

cause renal, reproduction and gastrointestinal

tract damage, has the potential to alter both

the gastrointestinal and respiratory microbiome

in broilers.